Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.33■□□□□ 0.21
Cchcr1Q8K2I2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cchcr1Q8K2I2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cchcr1Q8K2I2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.33■□□□□ 0.21
Cchcr1Q8K2I2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cchcr1Q8K2I2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cchcr1Q8K2I2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cchcr1Q8K2I2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Gm8410-201ENSMUST00000117225 605 ntBASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Gm15460-201ENSMUST00000118147 391 ntBASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Mir1897-201ENSMUST00000122581 272 ntBASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Gm25144-201ENSMUST00000179561 110 ntBASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Gm25352-201ENSMUST00000179815 110 ntBASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cchcr1Q8K2I2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Gm27622-201ENSMUST00000183779 60 ntBASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Gm21470-201ENSMUST00000187680 696 ntBASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Gm9229-201ENSMUST00000222777 126 ntBASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Mir497b-201ENSMUST00000093601 125 ntBASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cchcr1Q8K2I2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Shd-206ENSMUST00000225145 998 ntBASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms