Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmgcs1Q8JZK9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Hmgcs1Q8JZK9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Gm12428-201ENSMUST00000119844 727 ntBASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Gm43575-201ENSMUST00000196420 516 ntBASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgcs1Q8JZK9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgcs1Q8JZK9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgcs1Q8JZK9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgcs1Q8JZK9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.17□□□□□ -0.3
Hmgcs1Q8JZK9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgcs1Q8JZK9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgcs1Q8JZK9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hmgcs1Q8JZK9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.17□□□□□ -0.3
Hmgcs1Q8JZK9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgcs1Q8JZK9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgcs1Q8JZK9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms