Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.2□□□□□ -0.3
CroccQ8CJ40 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.2□□□□□ -0.3
CroccQ8CJ40 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.2□□□□□ -0.3
CroccQ8CJ40 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Gm15920-201ENSMUST00000118998 402 ntBASIC13.2□□□□□ -0.3
CroccQ8CJ40 Gm4804-201ENSMUST00000182234 999 ntBASIC13.2□□□□□ -0.3
CroccQ8CJ40 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.2□□□□□ -0.3
CroccQ8CJ40 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Gm17795-201ENSMUST00000214505 757 ntBASIC13.2□□□□□ -0.3
CroccQ8CJ40 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CroccQ8CJ40 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CroccQ8CJ40 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.19□□□□□ -0.3
CroccQ8CJ40 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CroccQ8CJ40 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.19□□□□□ -0.3
CroccQ8CJ40 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CroccQ8CJ40 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.18□□□□□ -0.3
CroccQ8CJ40 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.18□□□□□ -0.3
CroccQ8CJ40 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.18□□□□□ -0.3
CroccQ8CJ40 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.18□□□□□ -0.3
CroccQ8CJ40 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CroccQ8CJ40 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Gm46209-201ENSMUST00000217912 553 ntBASIC13.18□□□□□ -0.3
CroccQ8CJ40 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.18□□□□□ -0.3
CroccQ8CJ40 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.18□□□□□ -0.3
CroccQ8CJ40 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Mir7023-201ENSMUST00000185093 64 ntBASIC13.18□□□□□ -0.3
CroccQ8CJ40 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.18□□□□□ -0.3
CroccQ8CJ40 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.18□□□□□ -0.3
CroccQ8CJ40 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.18□□□□□ -0.3
CroccQ8CJ40 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.18□□□□□ -0.3
CroccQ8CJ40 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms