Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ShfQ8CG80 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
ShfQ8CG80 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.32□□□□□ -0.44
ShfQ8CG80 Grk6-205ENSMUST00000224653 2976 ntBASIC12.32□□□□□ -0.44
ShfQ8CG80 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
ShfQ8CG80 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ShfQ8CG80 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
ShfQ8CG80 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
ShfQ8CG80 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ShfQ8CG80 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ShfQ8CG80 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm22065-201ENSMUST00000103753 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm22066-201ENSMUST00000103761 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm24932-201ENSMUST00000103763 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm24115-201ENSMUST00000103799 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm22190-201ENSMUST00000103827 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm22191-201ENSMUST00000103831 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm24721-201ENSMUST00000103849 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm28018-201ENSMUST00000103869 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm26399-201ENSMUST00000103937 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm12428-201ENSMUST00000119844 727 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm25349-201ENSMUST00000177728 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm23616-201ENSMUST00000177797 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm25871-201ENSMUST00000177816 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm24752-201ENSMUST00000178240 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm24496-201ENSMUST00000178287 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm25649-201ENSMUST00000178476 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm25548-201ENSMUST00000178681 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm23147-201ENSMUST00000178841 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm26095-201ENSMUST00000179270 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm22171-201ENSMUST00000179283 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm23936-201ENSMUST00000179354 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm22619-201ENSMUST00000179516 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm25255-201ENSMUST00000179579 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm24755-201ENSMUST00000179691 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm26506-201ENSMUST00000179692 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm25086-201ENSMUST00000179931 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm23243-201ENSMUST00000180047 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm24659-201ENSMUST00000180212 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm24169-201ENSMUST00000180244 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm23689-201ENSMUST00000180354 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm27359-201ENSMUST00000184153 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm27785-201ENSMUST00000184268 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm27466-201ENSMUST00000184396 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm27703-201ENSMUST00000184836 110 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.31□□□□□ -0.44
ShfQ8CG80 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.31□□□□□ -0.44
ShfQ8CG80 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
ShfQ8CG80 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.31□□□□□ -0.44
ShfQ8CG80 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ShfQ8CG80 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ShfQ8CG80 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ShfQ8CG80 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.3□□□□□ -0.44
ShfQ8CG80 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms