Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf31Q8CCF0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf31Q8CCF0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf31Q8CCF0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf31Q8CCF0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Gm27701-201ENSMUST00000184498 110 ntBASIC15.08■□□□□ 0
Prpf31Q8CCF0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.08■□□□□ 0
Prpf31Q8CCF0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.08■□□□□ 0
Prpf31Q8CCF0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.08■□□□□ 0
Prpf31Q8CCF0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.08■□□□□ 0
Prpf31Q8CCF0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf31Q8CCF0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.07■□□□□ 0
Prpf31Q8CCF0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Gm11478-201ENSMUST00000117851 599 ntBASIC15.07■□□□□ 0
Prpf31Q8CCF0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.07■□□□□ 0
Prpf31Q8CCF0 Gm28911-201ENSMUST00000188837 117 ntBASIC15.07■□□□□ 0
Prpf31Q8CCF0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.07■□□□□ 0
Prpf31Q8CCF0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.07■□□□□ 0
Prpf31Q8CCF0 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.07■□□□□ 0
Prpf31Q8CCF0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf31Q8CCF0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Prpf31Q8CCF0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.07■□□□□ 0
Prpf31Q8CCF0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.06■□□□□ 0
Prpf31Q8CCF0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Gm26464-201ENSMUST00000157094 305 ntBASIC15.06■□□□□ 0
Prpf31Q8CCF0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.06■□□□□ 0
Prpf31Q8CCF0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf31Q8CCF0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms