Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cfap54Q8C6S9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cfap54Q8C6S9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cfap54Q8C6S9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cfap54Q8C6S9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cfap54Q8C6S9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cfap54Q8C6S9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cfap54Q8C6S9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm11439-201ENSMUST00000118598 409 ntBASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gm9083-201ENSMUST00000120423 819 ntBASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cfap54Q8C6S9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cfap54Q8C6S9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cfap54Q8C6S9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Gm24830-201ENSMUST00000102024 166 ntBASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Gm7857-201ENSMUST00000117957 358 ntBASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Gm12363-201ENSMUST00000122250 668 ntBASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.95□□□□□ -0.34
Cfap54Q8C6S9 Gm25890-201ENSMUST00000177643 165 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms