Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Gm15376-201ENSMUST00000122258 783 ntBASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Gm26464-201ENSMUST00000157094 305 ntBASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Gm6180-201ENSMUST00000065243 498 ntBASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Gm12485-201ENSMUST00000119641 291 ntBASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Mir7654-201ENSMUST00000185082 70 ntBASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.1□□□□□ -0.15
Nup54Q8BTS4 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.1□□□□□ -0.15
Nup54Q8BTS4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup54Q8BTS4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nup54Q8BTS4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nup54Q8BTS4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nup54Q8BTS4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Nup54Q8BTS4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nup54Q8BTS4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.08□□□□□ -0.16
Nup54Q8BTS4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms