Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Gm19163-201ENSMUST00000223313 780 ntBASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col16a1Q8BLX7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Gm12012-201ENSMUST00000118857 1066 ntBASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Gm12715-201ENSMUST00000121430 1128 ntBASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col16a1Q8BLX7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Gm11439-201ENSMUST00000118598 409 ntBASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Gm27341-201ENSMUST00000183570 106 ntBASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col16a1Q8BLX7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Gm18584-201ENSMUST00000203098 964 ntBASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Gm4768-201ENSMUST00000206199 686 ntBASIC17.73■□□□□ 0.43
Col16a1Q8BLX7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms