Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim50Q810I2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim50Q810I2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Trim50Q810I2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim50Q810I2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim50Q810I2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim50Q810I2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.46□□□□□ -0.25
Trim50Q810I2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Trim50Q810I2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.46□□□□□ -0.25
Trim50Q810I2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Gm12585-201ENSMUST00000117307 290 ntBASIC13.46□□□□□ -0.25
Trim50Q810I2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.46□□□□□ -0.25
Trim50Q810I2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim50Q810I2 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.46□□□□□ -0.25
Trim50Q810I2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim50Q810I2 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.46□□□□□ -0.26
Trim50Q810I2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim50Q810I2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim50Q810I2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim50Q810I2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim50Q810I2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trim50Q810I2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Trim50Q810I2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trim50Q810I2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim50Q810I2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim50Q810I2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim50Q810I2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim50Q810I2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Gm12151-201ENSMUST00000121374 290 ntBASIC13.45□□□□□ -0.26
Trim50Q810I2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim50Q810I2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.45□□□□□ -0.26
Trim50Q810I2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim50Q810I2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim50Q810I2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim50Q810I2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim50Q810I2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.45□□□□□ -0.26
Trim50Q810I2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim50Q810I2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trim50Q810I2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim50Q810I2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim50Q810I2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Trim50Q810I2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim50Q810I2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim50Q810I2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.44□□□□□ -0.26
Trim50Q810I2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Gm27989-201ENSMUST00000184721 107 ntBASIC13.44□□□□□ -0.26
Trim50Q810I2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Gm10766-202ENSMUST00000194123 606 ntBASIC13.44□□□□□ -0.26
Trim50Q810I2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.44□□□□□ -0.26
Trim50Q810I2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim50Q810I2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.44□□□□□ -0.26
Trim50Q810I2 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.44□□□□□ -0.26
Trim50Q810I2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim50Q810I2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim50Q810I2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms