Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Snord83b-201ENSMUST00000104546 94 ntBASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Mir6979-201ENSMUST00000183927 56 ntBASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Gm21769-201ENSMUST00000211922 111 ntBASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ttc28Q80XJ3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Gm4986-201ENSMUST00000119731 549 ntBASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Gm2383-201ENSMUST00000181461 807 ntBASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Gm10608-202ENSMUST00000213924 676 ntBASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Gm13123-201ENSMUST00000122173 492 ntBASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Gm37489-201ENSMUST00000191883 159 ntBASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ttc28Q80XJ3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Gm24255-201ENSMUST00000104481 128 ntBASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ttc28Q80XJ3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms