Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 BC001981-202ENSMUST00000191393 1545 ntBASIC15.92■□□□□ 0.14
Prpf40bQ80W14 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.92■□□□□ 0.14
Prpf40bQ80W14 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Prpf40bQ80W14 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf40bQ80W14 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf40bQ80W14 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Prpf40bQ80W14 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf40bQ80W14 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf40bQ80W14 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Prpf40bQ80W14 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Gm37230-201ENSMUST00000194491 818 ntBASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Gm7561-201ENSMUST00000211203 886 ntBASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf40bQ80W14 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gm11814-201ENSMUST00000119515 929 ntBASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gm8652-201ENSMUST00000181363 964 ntBASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gm27847-201ENSMUST00000183711 107 ntBASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gm27375-201ENSMUST00000183799 107 ntBASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gm9182-201ENSMUST00000217829 639 ntBASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gm7399-201ENSMUST00000032395 858 ntBASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gm6091-201ENSMUST00000098307 165 ntBASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf40bQ80W14 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Prpf40bQ80W14 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Prpf40bQ80W14 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms