Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Gm43094-201ENSMUST00000196549 921 ntBASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Gm43433-201ENSMUST00000196573 481 ntBASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh19Q80TF3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Gm12485-201ENSMUST00000119641 291 ntBASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh19Q80TF3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.52□□□□□ -0.24
Pcdh19Q80TF3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh19Q80TF3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh19Q80TF3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh19Q80TF3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh19Q80TF3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh19Q80TF3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh19Q80TF3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh19Q80TF3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh19Q80TF3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms