Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm29310-201ENSMUST00000185468 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21825-201ENSMUST00000185728 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm29109-201ENSMUST00000185895 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21896-201ENSMUST00000186520 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21873-201ENSMUST00000186728 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21794-201ENSMUST00000187056 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21880-201ENSMUST00000187275 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21826-201ENSMUST00000187451 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21198-201ENSMUST00000188393 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21749-201ENSMUST00000189343 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21901-201ENSMUST00000189568 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm29424-201ENSMUST00000189716 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm28599-201ENSMUST00000189838 694 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21867-201ENSMUST00000189917 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm29269-201ENSMUST00000190087 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21722-201ENSMUST00000190153 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm28423-201ENSMUST00000190701 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21899-201ENSMUST00000190745 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21910-201ENSMUST00000191163 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21849-201ENSMUST00000191571 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm28678-201ENSMUST00000191593 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm20910-201ENSMUST00000193268 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Gm21871-201ENSMUST00000194621 696 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 AA619741-201ENSMUST00000195095 646 ntBASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf38bQ80SY5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf38bQ80SY5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf38bQ80SY5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf38bQ80SY5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Prpf38bQ80SY5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Prpf38bQ80SY5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Prpf38bQ80SY5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf38bQ80SY5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Prpf38bQ80SY5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf38bQ80SY5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Gm27631-201ENSMUST00000184163 466 ntBASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Rubie-203ENSMUST00000227803 2430 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms