Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh8Q7TSK3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh8Q7TSK3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Gm8602-201ENSMUST00000184045 607 ntBASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Gm43438-201ENSMUST00000198133 379 ntBASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.62□□□□□ -0.23
Pcdh8Q7TSK3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Gm15806-201ENSMUST00000120696 955 ntBASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Gm18905-201ENSMUST00000205454 928 ntBASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Gm18307-201ENSMUST00000206864 949 ntBASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Pcdh8Q7TSK3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh8Q7TSK3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms