Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Gm16570-201ENSMUST00000161951 436 ntBASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Gm29608-201ENSMUST00000190444 463 ntBASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Gm43133-201ENSMUST00000197472 463 ntBASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Gm43758-201ENSMUST00000199500 367 ntBASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.08□□□□□ -0.47
Snrnp40Q6PE01 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Snrnp40Q6PE01 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Snrnp40Q6PE01 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Snrnp40Q6PE01 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Gm11793-201ENSMUST00000120433 981 ntBASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Gm38144-201ENSMUST00000192790 465 ntBASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Gm37466-201ENSMUST00000195692 652 ntBASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Gm9368-201ENSMUST00000219348 831 ntBASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Gm17330-201ENSMUST00000221047 165 ntBASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.08□□□□□ -0.48
Snrnp40Q6PE01 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Mir686-201ENSMUST00000102174 109 ntBASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Gm15770-201ENSMUST00000117498 584 ntBASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Gm15808-201ENSMUST00000119046 604 ntBASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Gm26927-201ENSMUST00000182385 965 ntBASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Gm38341-201ENSMUST00000195357 515 ntBASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Gm37497-201ENSMUST00000195830 798 ntBASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.07□□□□□ -0.48
Snrnp40Q6PE01 Cts7-204ENSMUST00000225321 1257 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms