Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmgb4Q6P8W9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Gm17795-201ENSMUST00000214505 757 ntBASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmgb4Q6P8W9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Gm12341-201ENSMUST00000119724 503 ntBASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Gm5354-201ENSMUST00000182417 973 ntBASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmgb4Q6P8W9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmgb4Q6P8W9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmgb4Q6P8W9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmgb4Q6P8W9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms