Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Gm27430-201ENSMUST00000184585 107 ntBASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Gm21470-201ENSMUST00000187680 696 ntBASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Gm44333-201ENSMUST00000197168 107 ntBASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Gm6888-201ENSMUST00000221983 706 ntBASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp140Q6NSQ5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Gm13616-201ENSMUST00000120600 222 ntBASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Gm43703-201ENSMUST00000200523 763 ntBASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sp140Q6NSQ5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Sp140Q6NSQ5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Gm13223-201ENSMUST00000118609 747 ntBASIC14□□□□□ -0.17
Sp140Q6NSQ5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 AC153872.1-201ENSMUST00000199539 128 ntBASIC14□□□□□ -0.17
Sp140Q6NSQ5 Gm44344-201ENSMUST00000200287 129 ntBASIC14□□□□□ -0.17
Sp140Q6NSQ5 Gm4971-201ENSMUST00000205991 1108 ntBASIC14□□□□□ -0.17
Sp140Q6NSQ5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sp140Q6NSQ5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms