Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sdc3Q64519 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Sdc3Q64519 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.29□□□□□ -0.28
Sdc3Q64519 Gm14928-201ENSMUST00000120198 477 ntBASIC13.29□□□□□ -0.28
Sdc3Q64519 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.29□□□□□ -0.28
Sdc3Q64519 Gm21470-201ENSMUST00000187680 696 ntBASIC13.29□□□□□ -0.28
Sdc3Q64519 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.29□□□□□ -0.28
Sdc3Q64519 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.29□□□□□ -0.28
Sdc3Q64519 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.29□□□□□ -0.28
Sdc3Q64519 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.29□□□□□ -0.28
Sdc3Q64519 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.29□□□□□ -0.28
Sdc3Q64519 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.29□□□□□ -0.28
Sdc3Q64519 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.29□□□□□ -0.28
Sdc3Q64519 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.29□□□□□ -0.28
Sdc3Q64519 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.29□□□□□ -0.28
Sdc3Q64519 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sdc3Q64519 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sdc3Q64519 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.29□□□□□ -0.28
Sdc3Q64519 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sdc3Q64519 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Gm22189-201ENSMUST00000103822 86 ntBASIC13.28□□□□□ -0.28
Sdc3Q64519 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.28□□□□□ -0.28
Sdc3Q64519 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.28□□□□□ -0.28
Sdc3Q64519 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Sdc3Q64519 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Gm21854-201ENSMUST00000179901 471 ntBASIC13.28□□□□□ -0.28
Sdc3Q64519 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sdc3Q64519 Gm5745-201ENSMUST00000183748 313 ntBASIC13.28□□□□□ -0.28
Sdc3Q64519 Gm37714-201ENSMUST00000194742 342 ntBASIC13.28□□□□□ -0.28
Sdc3Q64519 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.28□□□□□ -0.28
Sdc3Q64519 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.28□□□□□ -0.28
Sdc3Q64519 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.28□□□□□ -0.28
Sdc3Q64519 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sdc3Q64519 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.28□□□□□ -0.28
Sdc3Q64519 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sdc3Q64519 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.28□□□□□ -0.28
Sdc3Q64519 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.28□□□□□ -0.28
Sdc3Q64519 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Rubie-203ENSMUST00000227803 2430 ntBASIC13.28□□□□□ -0.28
Sdc3Q64519 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sdc3Q64519 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sdc3Q64519 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc3Q64519 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Sdc3Q64519 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc3Q64519 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc3Q64519 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc3Q64519 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc3Q64519 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.27□□□□□ -0.28
Sdc3Q64519 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.27□□□□□ -0.28
Sdc3Q64519 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc3Q64519 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sdc3Q64519 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Sdc3Q64519 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sdc3Q64519 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sdc3Q64519 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms