Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.79□□□□□ -0.36
AtmQ62388 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
AtmQ62388 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AtmQ62388 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AtmQ62388 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
AtmQ62388 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
AtmQ62388 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
AtmQ62388 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.78□□□□□ -0.36
AtmQ62388 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
AtmQ62388 Gm27438-201ENSMUST00000183480 110 ntBASIC12.78□□□□□ -0.36
AtmQ62388 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Gm45219-201ENSMUST00000205602 465 ntBASIC12.78□□□□□ -0.36
AtmQ62388 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
AtmQ62388 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
AtmQ62388 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.78□□□□□ -0.36
AtmQ62388 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.78□□□□□ -0.36
AtmQ62388 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
AtmQ62388 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
AtmQ62388 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.78□□□□□ -0.36
AtmQ62388 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AtmQ62388 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
AtmQ62388 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.77□□□□□ -0.36
AtmQ62388 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
AtmQ62388 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.77□□□□□ -0.36
AtmQ62388 AA914427-201ENSMUST00000193194 1166 ntBASIC12.77□□□□□ -0.36
AtmQ62388 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.77□□□□□ -0.36
AtmQ62388 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.77□□□□□ -0.36
AtmQ62388 Gm19163-201ENSMUST00000223313 780 ntBASIC12.77□□□□□ -0.36
AtmQ62388 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.77□□□□□ -0.36
AtmQ62388 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
AtmQ62388 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AtmQ62388 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AtmQ62388 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AtmQ62388 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.77□□□□□ -0.36
AtmQ62388 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AtmQ62388 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
AtmQ62388 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
AtmQ62388 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
AtmQ62388 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
AtmQ62388 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
AtmQ62388 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
AtmQ62388 Gm11618-201ENSMUST00000117946 267 ntBASIC12.77□□□□□ -0.37
AtmQ62388 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.77□□□□□ -0.37
AtmQ62388 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
AtmQ62388 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
AtmQ62388 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.77□□□□□ -0.37
AtmQ62388 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.77□□□□□ -0.37
AtmQ62388 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
AtmQ62388 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
AtmQ62388 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.77□□□□□ -0.37
AtmQ62388 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
AtmQ62388 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AtmQ62388 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
AtmQ62388 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AtmQ62388 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.76□□□□□ -0.37
AtmQ62388 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
AtmQ62388 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.76□□□□□ -0.37
AtmQ62388 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
AtmQ62388 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
AtmQ62388 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms