Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.27■□□□□ 0.2
Ctr9Q62018 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctr9Q62018 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ctr9Q62018 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.27■□□□□ 0.19
Ctr9Q62018 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ctr9Q62018 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.27■□□□□ 0.19
Ctr9Q62018 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ctr9Q62018 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Ctr9Q62018 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Ctr9Q62018 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.26■□□□□ 0.19
Ctr9Q62018 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Ctr9Q62018 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.26■□□□□ 0.19
Ctr9Q62018 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.26■□□□□ 0.19
Ctr9Q62018 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.26■□□□□ 0.19
Ctr9Q62018 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ctr9Q62018 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ctr9Q62018 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.26■□□□□ 0.19
Ctr9Q62018 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctr9Q62018 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ctr9Q62018 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ctr9Q62018 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ctr9Q62018 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ctr9Q62018 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ctr9Q62018 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ctr9Q62018 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Ctr9Q62018 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.25■□□□□ 0.19
Ctr9Q62018 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ctr9Q62018 Gm11524-201ENSMUST00000119349 807 ntBASIC16.25■□□□□ 0.19
Ctr9Q62018 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.25■□□□□ 0.19
Ctr9Q62018 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.25■□□□□ 0.19
Ctr9Q62018 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.25■□□□□ 0.19
Ctr9Q62018 Gm18307-201ENSMUST00000206864 949 ntBASIC16.25■□□□□ 0.19
Ctr9Q62018 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ctr9Q62018 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.25■□□□□ 0.19
Ctr9Q62018 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ctr9Q62018 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.25■□□□□ 0.19
Ctr9Q62018 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.25■□□□□ 0.19
Ctr9Q62018 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ctr9Q62018 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.24■□□□□ 0.19
Ctr9Q62018 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ctr9Q62018 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.24■□□□□ 0.19
Ctr9Q62018 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ctr9Q62018 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Ctr9Q62018 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Ctr9Q62018 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ctr9Q62018 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ctr9Q62018 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ctr9Q62018 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Gm26464-201ENSMUST00000157094 305 ntBASIC16.24■□□□□ 0.19
Ctr9Q62018 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.24■□□□□ 0.19
Ctr9Q62018 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.24■□□□□ 0.19
Ctr9Q62018 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.24■□□□□ 0.19
Ctr9Q62018 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ctr9Q62018 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ctr9Q62018 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ctr9Q62018 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms