Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Sox17Q61473 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox17Q61473 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox17Q61473 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Sox17Q61473 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sox17Q61473 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox17Q61473 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox17Q61473 Gm9103-201ENSMUST00000119371 405 ntBASIC12.93□□□□□ -0.34
Sox17Q61473 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.93□□□□□ -0.34
Sox17Q61473 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Gm5864-201ENSMUST00000202263 970 ntBASIC12.93□□□□□ -0.34
Sox17Q61473 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox17Q61473 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.93□□□□□ -0.34
Sox17Q61473 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox17Q61473 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.93□□□□□ -0.34
Sox17Q61473 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox17Q61473 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox17Q61473 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox17Q61473 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox17Q61473 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox17Q61473 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sox17Q61473 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Sox17Q61473 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sox17Q61473 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Mir5126-201ENSMUST00000175513 77 ntBASIC12.92□□□□□ -0.34
Sox17Q61473 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sox17Q61473 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sox17Q61473 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.92□□□□□ -0.34
Sox17Q61473 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.92□□□□□ -0.34
Sox17Q61473 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sox17Q61473 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.92□□□□□ -0.34
Sox17Q61473 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Sox17Q61473 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.92□□□□□ -0.34
Sox17Q61473 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Sox17Q61473 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox17Q61473 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sox17Q61473 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox17Q61473 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox17Q61473 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sox17Q61473 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.91□□□□□ -0.34
Sox17Q61473 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sox17Q61473 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox17Q61473 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms