Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd1Q61466 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.35□□□□□ -0.11
Smarcd1Q61466 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Gm15678-201ENSMUST00000117573 960 ntBASIC14.35□□□□□ -0.11
Smarcd1Q61466 Gm12138-201ENSMUST00000122180 951 ntBASIC14.35□□□□□ -0.11
Smarcd1Q61466 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.35□□□□□ -0.11
Smarcd1Q61466 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd1Q61466 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.34□□□□□ -0.11
Smarcd1Q61466 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.34□□□□□ -0.11
Smarcd1Q61466 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.34□□□□□ -0.11
Smarcd1Q61466 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcd1Q61466 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcd1Q61466 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarcd1Q61466 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Gm28911-201ENSMUST00000188837 117 ntBASIC14.33□□□□□ -0.12
Smarcd1Q61466 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.33□□□□□ -0.12
Smarcd1Q61466 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarcd1Q61466 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms