Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Six4Q61321 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Six4Q61321 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Six4Q61321 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Gm7488-201ENSMUST00000117148 684 ntBASIC13.91□□□□□ -0.18
Six4Q61321 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Six4Q61321 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 Gm5866-201ENSMUST00000177881 973 ntBASIC13.91□□□□□ -0.18
Six4Q61321 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.91□□□□□ -0.18
Six4Q61321 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.91□□□□□ -0.18
Six4Q61321 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.91□□□□□ -0.18
Six4Q61321 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Six4Q61321 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.91□□□□□ -0.18
Six4Q61321 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.91□□□□□ -0.18
Six4Q61321 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.91□□□□□ -0.18
Six4Q61321 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Six4Q61321 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Six4Q61321 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.9□□□□□ -0.18
Six4Q61321 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.9□□□□□ -0.18
Six4Q61321 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Six4Q61321 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.9□□□□□ -0.18
Six4Q61321 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Six4Q61321 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Six4Q61321 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.9□□□□□ -0.18
Six4Q61321 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Six4Q61321 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Six4Q61321 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Six4Q61321 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Six4Q61321 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Six4Q61321 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.9□□□□□ -0.19
Six4Q61321 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.89□□□□□ -0.19
Six4Q61321 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Six4Q61321 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms