Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Col11a1Q61245 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col11a1Q61245 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Gm28450-201ENSMUST00000187349 638 ntBASIC15.12■□□□□ 0.01
Col11a1Q61245 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.12■□□□□ 0.01
Col11a1Q61245 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col11a1Q61245 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col11a1Q61245 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Gm3096-201ENSMUST00000185770 364 ntBASIC15.11■□□□□ 0.01
Col11a1Q61245 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.11■□□□□ 0.01
Col11a1Q61245 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col11a1Q61245 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.1■□□□□ 0.01
Col11a1Q61245 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Col11a1Q61245 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.1■□□□□ 0.01
Col11a1Q61245 Ighv5-7-201ENSMUST00000192302 244 ntBASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm45224-201ENSMUST00000208203 414 ntBASIC15.1■□□□□ 0.01
Col11a1Q61245 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.1■□□□□ 0.01
Col11a1Q61245 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm13461-201ENSMUST00000120980 662 ntBASIC15.1■□□□□ 0.01
Col11a1Q61245 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col11a1Q61245 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms