Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ripk1Q60855 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Ripk1Q60855 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Gm22175-201ENSMUST00000175007 78 ntBASIC13.04□□□□□ -0.32
Ripk1Q60855 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.04□□□□□ -0.32
Ripk1Q60855 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.04□□□□□ -0.32
Ripk1Q60855 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ripk1Q60855 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.04□□□□□ -0.32
Ripk1Q60855 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ripk1Q60855 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ripk1Q60855 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ripk1Q60855 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.03□□□□□ -0.32
Ripk1Q60855 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.03□□□□□ -0.32
Ripk1Q60855 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Gm2445-201ENSMUST00000182798 989 ntBASIC13.03□□□□□ -0.32
Ripk1Q60855 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Gm33320-201ENSMUST00000192232 530 ntBASIC13.03□□□□□ -0.32
Ripk1Q60855 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ripk1Q60855 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ripk1Q60855 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.02□□□□□ -0.32
Ripk1Q60855 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ripk1Q60855 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ripk1Q60855 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ripk1Q60855 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ripk1Q60855 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ripk1Q60855 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ripk1Q60855 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ripk1Q60855 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ripk1Q60855 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ripk1Q60855 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Ripk1Q60855 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ripk1Q60855 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ripk1Q60855 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.02□□□□□ -0.33
Ripk1Q60855 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.02□□□□□ -0.33
Ripk1Q60855 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ripk1Q60855 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.02□□□□□ -0.33
Ripk1Q60855 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.02□□□□□ -0.33
Ripk1Q60855 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.02□□□□□ -0.33
Ripk1Q60855 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.02□□□□□ -0.33
Ripk1Q60855 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ripk1Q60855 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ripk1Q60855 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms