Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Traf3Q60803 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Traf3Q60803 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.43□□□□□ -0.1
Traf3Q60803 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.43□□□□□ -0.1
Traf3Q60803 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.43□□□□□ -0.1
Traf3Q60803 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Traf3Q60803 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Traf3Q60803 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Traf3Q60803 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.43□□□□□ -0.1
Traf3Q60803 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Traf3Q60803 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.43□□□□□ -0.1
Traf3Q60803 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Traf3Q60803 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Traf3Q60803 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf3Q60803 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Traf3Q60803 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Traf3Q60803 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Traf3Q60803 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Gm12859-201ENSMUST00000117834 427 ntBASIC14.42□□□□□ -0.1
Traf3Q60803 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Traf3Q60803 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.42□□□□□ -0.1
Traf3Q60803 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.42□□□□□ -0.1
Traf3Q60803 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Traf3Q60803 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.42□□□□□ -0.1
Traf3Q60803 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.42□□□□□ -0.1
Traf3Q60803 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.42□□□□□ -0.1
Traf3Q60803 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Traf3Q60803 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Traf3Q60803 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Traf3Q60803 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Traf3Q60803 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.41□□□□□ -0.1
Traf3Q60803 Gm27772-201ENSMUST00000184900 187 ntBASIC14.41□□□□□ -0.1
Traf3Q60803 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Traf3Q60803 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Traf3Q60803 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Traf3Q60803 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms