Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.38□□□□□ -0.11
Foxd4Q60688 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.38□□□□□ -0.11
Foxd4Q60688 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Foxd4Q60688 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Foxd4Q60688 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.38□□□□□ -0.11
Foxd4Q60688 Gm25109-201ENSMUST00000122474 114 ntBASIC14.38□□□□□ -0.11
Foxd4Q60688 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Rpph1-201ENSMUST00000175096 319 ntBASIC14.38□□□□□ -0.11
Foxd4Q60688 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Gm27920-201ENSMUST00000183953 96 ntBASIC14.38□□□□□ -0.11
Foxd4Q60688 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.38□□□□□ -0.11
Foxd4Q60688 CT025525.2-201ENSMUST00000227743 423 ntBASIC14.38□□□□□ -0.11
Foxd4Q60688 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.38□□□□□ -0.11
Foxd4Q60688 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Foxd4Q60688 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Foxd4Q60688 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Foxd4Q60688 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.38□□□□□ -0.11
Foxd4Q60688 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.38□□□□□ -0.11
Foxd4Q60688 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxd4Q60688 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.37□□□□□ -0.11
Foxd4Q60688 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Foxd4Q60688 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Foxd4Q60688 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.37□□□□□ -0.11
Foxd4Q60688 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Gm5479-201ENSMUST00000160578 435 ntBASIC14.37□□□□□ -0.11
Foxd4Q60688 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.37□□□□□ -0.11
Foxd4Q60688 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Foxd4Q60688 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Gm37230-201ENSMUST00000194491 818 ntBASIC14.37□□□□□ -0.11
Foxd4Q60688 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.37□□□□□ -0.11
Foxd4Q60688 Gm44872-201ENSMUST00000207864 420 ntBASIC14.37□□□□□ -0.11
Foxd4Q60688 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.37□□□□□ -0.11
Foxd4Q60688 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 AC136019.1-201ENSMUST00000226503 1412 ntBASIC14.37□□□□□ -0.11
Foxd4Q60688 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Foxd4Q60688 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxd4Q60688 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.37□□□□□ -0.11
Foxd4Q60688 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.36□□□□□ -0.11
Foxd4Q60688 Gm42479-201ENSMUST00000198654 1356 ntBASIC14.36□□□□□ -0.11
Foxd4Q60688 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Foxd4Q60688 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.36□□□□□ -0.11
Foxd4Q60688 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Foxd4Q60688 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Foxd4Q60688 Gm15427-201ENSMUST00000117288 531 ntBASIC14.36□□□□□ -0.11
Foxd4Q60688 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.36□□□□□ -0.11
Foxd4Q60688 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Foxd4Q60688 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.36□□□□□ -0.11
Foxd4Q60688 Gm27494-201ENSMUST00000184735 189 ntBASIC14.36□□□□□ -0.11
Foxd4Q60688 Gm8581-201ENSMUST00000188636 890 ntBASIC14.36□□□□□ -0.11
Foxd4Q60688 Gm38247-201ENSMUST00000194675 433 ntBASIC14.36□□□□□ -0.11
Foxd4Q60688 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.36□□□□□ -0.11
Foxd4Q60688 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Foxd4Q60688 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Foxd4Q60688 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Foxd4Q60688 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxd4Q60688 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms