Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav5d-4Q5R1F6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Gm29741-201ENSMUST00000192667 421 ntBASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav5d-4Q5R1F6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Gm22175-201ENSMUST00000175007 78 ntBASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Gm2445-201ENSMUST00000182798 989 ntBASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Gm38294-201ENSMUST00000192831 381 ntBASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Gm46209-201ENSMUST00000217912 553 ntBASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav5d-4Q5R1F6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms