Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rnf20Q5DTM8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rnf20Q5DTM8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Gm8927-201ENSMUST00000181978 981 ntBASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Gm3222-201ENSMUST00000071282 990 ntBASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Rnf20Q5DTM8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Gm13385-201ENSMUST00000121089 220 ntBASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Gm7775-201ENSMUST00000218871 853 ntBASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Gm9063-201ENSMUST00000223299 582 ntBASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Gm5867-201ENSMUST00000063197 592 ntBASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Rnf20Q5DTM8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rnf20Q5DTM8 Mir6956-201ENSMUST00000183598 62 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms