Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Gm15460-201ENSMUST00000118147 391 ntBASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Gm27892-201ENSMUST00000185017 106 ntBASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 AC106830.1-201ENSMUST00000228032 1003 ntBASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Gm18829-201ENSMUST00000188150 1622 ntBASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tmem40Q4FJU9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Gm5354-201ENSMUST00000182417 973 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Gm27701-201ENSMUST00000184498 110 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Mir6420-201ENSMUST00000185032 102 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Gm28911-201ENSMUST00000188837 117 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Gm28745-201ENSMUST00000190069 305 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 AY702102-202ENSMUST00000194651 1173 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 BC001981-202ENSMUST00000191393 1545 ntBASIC11.81□□□□□ -0.52
Tmem40Q4FJU9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Gm12341-201ENSMUST00000119724 503 ntBASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.8□□□□□ -0.52
Tmem40Q4FJU9 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms