Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp48Q3V0C5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Gm9726-201ENSMUST00000180321 678 ntBASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Gm21470-201ENSMUST00000187680 696 ntBASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Gm7287-201ENSMUST00000205267 602 ntBASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Gm8463-201ENSMUST00000208573 613 ntBASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp48Q3V0C5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Gm29127-201ENSMUST00000188304 517 ntBASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
Usp48Q3V0C5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Gm5187-201ENSMUST00000117317 991 ntBASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.05■□□□□ 0.32
Usp48Q3V0C5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Usp48Q3V0C5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms