Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Fam196aQ3USH1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Mir698-201ENSMUST00000102164 109 ntBASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Gm12566-201ENSMUST00000121479 359 ntBASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Mir7032-201ENSMUST00000185154 79 ntBASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Fam196aQ3USH1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm24830-201ENSMUST00000102024 166 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm11222-201ENSMUST00000119005 738 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm11964-201ENSMUST00000120982 444 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm25890-201ENSMUST00000177643 165 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm22614-201ENSMUST00000178300 165 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm2260-201ENSMUST00000184965 657 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm29608-201ENSMUST00000190444 463 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm8099-201ENSMUST00000200510 742 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm45186-201ENSMUST00000206874 478 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm18212-201ENSMUST00000211678 889 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm16372-201ENSMUST00000073088 450 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm22042-201ENSMUST00000082989 165 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm26232-201ENSMUST00000083360 166 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm24136-201ENSMUST00000083374 165 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm26110-201ENSMUST00000083971 165 ntBASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Fam196aQ3USH1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Fam196aQ3USH1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Fam196aQ3USH1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Fam196aQ3USH1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Fam196aQ3USH1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Fam196aQ3USH1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Fam196aQ3USH1 Gm11591-201ENSMUST00000120063 702 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms