Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Znf48Q3US17 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Znf48Q3US17 Gm18719-201ENSMUST00000196696 1413 ntBASIC11.52□□□□□ -0.57
Znf48Q3US17 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm11478-201ENSMUST00000117851 599 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Znf48Q3US17 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Znf48Q3US17 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm27533-201ENSMUST00000183800 152 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm27920-201ENSMUST00000183953 96 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm45384-201ENSMUST00000210451 277 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 AC154828.2-201ENSMUST00000220908 1070 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Znf48Q3US17 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.51□□□□□ -0.57
Znf48Q3US17 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Znf48Q3US17 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm15321-201ENSMUST00000121290 288 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm8502-201ENSMUST00000185708 901 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm21147-201ENSMUST00000186046 913 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm8510-201ENSMUST00000189202 895 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm2316-201ENSMUST00000190613 921 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm43084-201ENSMUST00000200696 947 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC11.5□□□□□ -0.57
Znf48Q3US17 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Znf48Q3US17 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.5□□□□□ -0.57
Znf48Q3US17 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Znf48Q3US17 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Znf48Q3US17 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms