Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa3Q3UPR0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa3Q3UPR0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.94□□□□□ -0.5
Shisa3Q3UPR0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Shisa3Q3UPR0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa3Q3UPR0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa3Q3UPR0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Gm11025-201ENSMUST00000140773 466 ntBASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Gm2445-201ENSMUST00000182798 989 ntBASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Gm20553-201ENSMUST00000204205 844 ntBASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Shisa3Q3UPR0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gm23935-201ENSMUST00000102303 57 ntBASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gm24270-201ENSMUST00000102326 57 ntBASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gm24245-201ENSMUST00000157318 57 ntBASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gm45612-201ENSMUST00000211320 160 ntBASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Shisa3Q3UPR0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms