Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Gm28631-201ENSMUST00000190740 334 ntBASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nlrc4Q3UP24 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nlrc4Q3UP24 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nlrc4Q3UP24 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Gm5354-201ENSMUST00000182417 973 ntBASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Gm43094-201ENSMUST00000196549 921 ntBASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nlrc4Q3UP24 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nlrc4Q3UP24 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.5□□□□□ -0.09
Nlrc4Q3UP24 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nlrc4Q3UP24 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nlrc4Q3UP24 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nlrc4Q3UP24 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms