Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Gm25927-201ENSMUST00000175058 117 ntBASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cks1brtQ3UNC9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gm13436-201ENSMUST00000120418 567 ntBASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Rprl3-201ENSMUST00000157400 290 ntBASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Nudt18-203ENSMUST00000228768 1578 ntBASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC9.88□□□□□ -0.83
Cks1brtQ3UNC9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cks1brtQ3UNC9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms