Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf149Q3U2C5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Gm11543-201ENSMUST00000120758 370 ntBASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Gm45612-201ENSMUST00000211320 160 ntBASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Rnf149Q3U2C5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Gm23935-201ENSMUST00000102303 57 ntBASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Gm24270-201ENSMUST00000102326 57 ntBASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Gm24245-201ENSMUST00000157318 57 ntBASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf149Q3U2C5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf149Q3U2C5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf149Q3U2C5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Rnf149Q3U2C5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.4□□□□□ -0.43
Rnf149Q3U2C5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf149Q3U2C5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf149Q3U2C5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms