Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Gm7284-201ENSMUST00000131667 944 ntBASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Gm18489-201ENSMUST00000172565 551 ntBASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Gm25927-201ENSMUST00000175058 117 ntBASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hddc2Q3SXD3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Gm14859-201ENSMUST00000117752 357 ntBASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Gm27646-201ENSMUST00000183989 110 ntBASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Gm6296-201ENSMUST00000222599 943 ntBASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hddc2Q3SXD3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms