Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.34□□□□□ -0.59
Trim63Q38HM4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim63Q38HM4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trim63Q38HM4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trim63Q38HM4 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trim63Q38HM4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.33□□□□□ -0.6
Trim63Q38HM4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim63Q38HM4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.33□□□□□ -0.6
Trim63Q38HM4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim63Q38HM4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.32□□□□□ -0.6
Trim63Q38HM4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.32□□□□□ -0.6
Trim63Q38HM4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.32□□□□□ -0.6
Trim63Q38HM4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim63Q38HM4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim63Q38HM4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms