Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm10312-201ENSMUST00000078515 489 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm8228-201ENSMUST00000189949 2192 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm14314-201ENSMUST00000118225 1015 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm20694-201ENSMUST00000176943 404 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm6450-201ENSMUST00000200896 574 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm44980-201ENSMUST00000205826 314 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 AC166095.1-201ENSMUST00000223731 1241 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm4604-201ENSMUST00000025040 390 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm11942-201ENSMUST00000180255 345 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm37299-201ENSMUST00000193951 826 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 AC166344.1-202ENSMUST00000224139 234 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 AC159308.2-201ENSMUST00000213592 2325 ntBASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
Ush2AQ2QI47 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm14780-201ENSMUST00000118387 2737 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm5555-201ENSMUST00000120352 1111 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm26185-201ENSMUST00000157692 266 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm24845-201ENSMUST00000158034 109 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Mir8115-201ENSMUST00000184992 119 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm5599-201ENSMUST00000209602 788 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm12403-201ENSMUST00000121384 959 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gm4335-201ENSMUST00000182581 1004 ntBASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ush2AQ2QI47 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms