Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC20.71■□□□□ 0.91
Col17a1Q07563 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col17a1Q07563 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col17a1Q07563 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col17a1Q07563 Gm6254-201ENSMUST00000168178 1072 ntBASIC20.71■□□□□ 0.91
Col17a1Q07563 Gm32999-201ENSMUST00000192693 562 ntBASIC20.71■□□□□ 0.91
Col17a1Q07563 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col17a1Q07563 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col17a1Q07563 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Col17a1Q07563 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col17a1Q07563 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col17a1Q07563 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col17a1Q07563 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col17a1Q07563 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col17a1Q07563 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Col17a1Q07563 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC20.7■□□□□ 0.9
Col17a1Q07563 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col17a1Q07563 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col17a1Q07563 Gm6963-201ENSMUST00000147879 379 ntBASIC20.7■□□□□ 0.9
Col17a1Q07563 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col17a1Q07563 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC20.7■□□□□ 0.9
Col17a1Q07563 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Col17a1Q07563 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC20.7■□□□□ 0.9
Col17a1Q07563 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC20.7■□□□□ 0.9
Col17a1Q07563 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC20.7■□□□□ 0.9
Col17a1Q07563 Gm6781-201ENSMUST00000038304 1242 ntBASIC20.7■□□□□ 0.9
Col17a1Q07563 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col17a1Q07563 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC20.7■□□□□ 0.9
Col17a1Q07563 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col17a1Q07563 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col17a1Q07563 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col17a1Q07563 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col17a1Q07563 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col17a1Q07563 Ssr1-204ENSMUST00000225319 1610 ntBASIC20.7■□□□□ 0.9
Col17a1Q07563 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.7■□□□□ 0.9
Col17a1Q07563 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC20.7■□□□□ 0.9
Col17a1Q07563 AC115735.4-201ENSMUST00000227460 1944 ntBASIC20.7■□□□□ 0.9
Col17a1Q07563 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Gm23949-201ENSMUST00000104027 127 ntBASIC20.69■□□□□ 0.9
Col17a1Q07563 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Gm13668-201ENSMUST00000119237 1001 ntBASIC20.69■□□□□ 0.9
Col17a1Q07563 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC20.69■□□□□ 0.9
Col17a1Q07563 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC20.69■□□□□ 0.9
Col17a1Q07563 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Col17a1Q07563 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Col17a1Q07563 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Col17a1Q07563 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC20.69■□□□□ 0.9
Col17a1Q07563 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC20.69■□□□□ 0.9
Col17a1Q07563 Aprt-ps-201ENSMUST00000212311 505 ntBASIC20.69■□□□□ 0.9
Col17a1Q07563 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col17a1Q07563 Gm9996-201ENSMUST00000070359 913 ntBASIC20.69■□□□□ 0.9
Col17a1Q07563 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Gm22877-201ENSMUST00000175451 105 ntBASIC20.68■□□□□ 0.9
Col17a1Q07563 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC20.68■□□□□ 0.9
Col17a1Q07563 CT009713.8-201ENSMUST00000225448 560 ntBASIC20.68■□□□□ 0.9
Col17a1Q07563 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Col17a1Q07563 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col17a1Q07563 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Col17a1Q07563 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC20.67■□□□□ 0.9
Col17a1Q07563 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col17a1Q07563 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Col17a1Q07563 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.67■□□□□ 0.9
Col17a1Q07563 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col17a1Q07563 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Col17a1Q07563 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col17a1Q07563 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.66■□□□□ 0.9
Col17a1Q07563 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms