Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdx4Q07424 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Gm27437-201ENSMUST00000183429 107 ntBASIC10.69□□□□□ -0.7
Cdx4Q07424 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cdx4Q07424 AA619741-201ENSMUST00000195095 646 ntBASIC10.69□□□□□ -0.7
Cdx4Q07424 Gm44344-201ENSMUST00000200287 129 ntBASIC10.69□□□□□ -0.7
Cdx4Q07424 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.69□□□□□ -0.7
Cdx4Q07424 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.69□□□□□ -0.7
Cdx4Q07424 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cdx4Q07424 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.69□□□□□ -0.7
Cdx4Q07424 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdx4Q07424 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.69□□□□□ -0.7
Cdx4Q07424 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdx4Q07424 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cdx4Q07424 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.69□□□□□ -0.7
Cdx4Q07424 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Cdx4Q07424 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdx4Q07424 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdx4Q07424 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdx4Q07424 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Cdx4Q07424 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cdx4Q07424 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Cdx4Q07424 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdx4Q07424 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Gm6222-201ENSMUST00000120787 396 ntBASIC10.68□□□□□ -0.7
Cdx4Q07424 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Gm27306-201ENSMUST00000183970 107 ntBASIC10.68□□□□□ -0.7
Cdx4Q07424 Gm29541-201ENSMUST00000191351 678 ntBASIC10.68□□□□□ -0.7
Cdx4Q07424 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdx4Q07424 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.68□□□□□ -0.7
Cdx4Q07424 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.68□□□□□ -0.7
Cdx4Q07424 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cdx4Q07424 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cdx4Q07424 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.68□□□□□ -0.7
Cdx4Q07424 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cdx4Q07424 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdx4Q07424 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdx4Q07424 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm29310-201ENSMUST00000185468 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21825-201ENSMUST00000185728 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm29109-201ENSMUST00000185895 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21896-201ENSMUST00000186520 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21873-201ENSMUST00000186728 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21794-201ENSMUST00000187056 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21880-201ENSMUST00000187275 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21826-201ENSMUST00000187451 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21198-201ENSMUST00000188393 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21749-201ENSMUST00000189343 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21901-201ENSMUST00000189568 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm29424-201ENSMUST00000189716 696 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm28599-201ENSMUST00000189838 694 ntBASIC10.67□□□□□ -0.7
Cdx4Q07424 Gm21867-201ENSMUST00000189917 696 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms