Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC13.28□□□□□ -0.28
Atf4Q06507 Gm5479-201ENSMUST00000160578 435 ntBASIC13.28□□□□□ -0.28
Atf4Q06507 Gm21854-201ENSMUST00000179901 471 ntBASIC13.28□□□□□ -0.28
Atf4Q06507 Gm9522-201ENSMUST00000182394 926 ntBASIC13.28□□□□□ -0.28
Atf4Q06507 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.28□□□□□ -0.28
Atf4Q06507 Gm6007-201ENSMUST00000208170 823 ntBASIC13.28□□□□□ -0.28
Atf4Q06507 Dupd1-202ENSMUST00000224735 548 ntBASIC13.28□□□□□ -0.28
Atf4Q06507 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Atf4Q06507 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Atf4Q06507 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Atf4Q06507 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Atf4Q06507 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Atf4Q06507 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.27□□□□□ -0.28
Atf4Q06507 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Atf4Q06507 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Atf4Q06507 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Atf4Q06507 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Atf4Q06507 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Atf4Q06507 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Atf4Q06507 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Atf4Q06507 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.27□□□□□ -0.29
Atf4Q06507 Gm15806-201ENSMUST00000120696 955 ntBASIC13.27□□□□□ -0.29
Atf4Q06507 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.27□□□□□ -0.29
Atf4Q06507 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC13.27□□□□□ -0.29
Atf4Q06507 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Atf4Q06507 AY702102-202ENSMUST00000194651 1173 ntBASIC13.27□□□□□ -0.29
Atf4Q06507 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.27□□□□□ -0.29
Atf4Q06507 Gm18624-201ENSMUST00000220966 658 ntBASIC13.27□□□□□ -0.29
Atf4Q06507 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.27□□□□□ -0.29
Atf4Q06507 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Atf4Q06507 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Atf4Q06507 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.27□□□□□ -0.29
Atf4Q06507 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Atf4Q06507 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.26□□□□□ -0.29
Atf4Q06507 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Atf4Q06507 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Gm29310-201ENSMUST00000185468 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm21825-201ENSMUST00000185728 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm29109-201ENSMUST00000185895 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm21896-201ENSMUST00000186520 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm21873-201ENSMUST00000186728 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm21794-201ENSMUST00000187056 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm21880-201ENSMUST00000187275 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atf4Q06507 Gm21826-201ENSMUST00000187451 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm21198-201ENSMUST00000188393 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm21749-201ENSMUST00000189343 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm21901-201ENSMUST00000189568 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm29424-201ENSMUST00000189716 696 ntBASIC13.26□□□□□ -0.29
Atf4Q06507 Gm28599-201ENSMUST00000189838 694 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms