Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.54□□□□□ -0.24
Col9a1Q05722 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm1866-201ENSMUST00000120701 477 ntBASIC13.54□□□□□ -0.24
Col9a1Q05722 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col9a1Q05722 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm43778-201ENSMUST00000199438 199 ntBASIC13.54□□□□□ -0.24
Col9a1Q05722 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm43124-201ENSMUST00000201878 278 ntBASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm44845-201ENSMUST00000208773 335 ntBASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm6458-201ENSMUST00000211573 635 ntBASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.54□□□□□ -0.24
Col9a1Q05722 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.54□□□□□ -0.24
Col9a1Q05722 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.54□□□□□ -0.24
Col9a1Q05722 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.54□□□□□ -0.24
Col9a1Q05722 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.54□□□□□ -0.24
Col9a1Q05722 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.54□□□□□ -0.24
Col9a1Q05722 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a1Q05722 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.53□□□□□ -0.24
Col9a1Q05722 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.53□□□□□ -0.24
Col9a1Q05722 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Gm37497-201ENSMUST00000195830 798 ntBASIC13.53□□□□□ -0.24
Col9a1Q05722 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.53□□□□□ -0.24
Col9a1Q05722 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.53□□□□□ -0.24
Col9a1Q05722 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.53□□□□□ -0.24
Col9a1Q05722 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.53□□□□□ -0.24
Col9a1Q05722 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a1Q05722 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.52□□□□□ -0.24
Col9a1Q05722 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a1Q05722 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a1Q05722 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a1Q05722 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Col9a1Q05722 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a1Q05722 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.52□□□□□ -0.24
Col9a1Q05722 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Col9a1Q05722 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col9a1Q05722 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.52□□□□□ -0.25
Col9a1Q05722 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.52□□□□□ -0.25
Col9a1Q05722 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a1Q05722 Mir6923-201ENSMUST00000184592 72 ntBASIC13.52□□□□□ -0.25
Col9a1Q05722 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms