Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Mir3102-201ENSMUST00000175555 104 ntBASIC14.73□□□□□ -0.05
VcpQ01853 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.73□□□□□ -0.05
VcpQ01853 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.73□□□□□ -0.05
VcpQ01853 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.73□□□□□ -0.05
VcpQ01853 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VcpQ01853 Gm45453-201ENSMUST00000211758 853 ntBASIC14.73□□□□□ -0.05
VcpQ01853 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.73□□□□□ -0.05
VcpQ01853 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.73□□□□□ -0.05
VcpQ01853 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.73□□□□□ -0.05
VcpQ01853 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VcpQ01853 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VcpQ01853 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
VcpQ01853 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VcpQ01853 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
VcpQ01853 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VcpQ01853 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.72□□□□□ -0.05
VcpQ01853 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.72□□□□□ -0.05
VcpQ01853 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.72□□□□□ -0.05
VcpQ01853 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Gm13392-201ENSMUST00000117708 150 ntBASIC14.72□□□□□ -0.05
VcpQ01853 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.72□□□□□ -0.05
VcpQ01853 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.72□□□□□ -0.05
VcpQ01853 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.72□□□□□ -0.05
VcpQ01853 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.72□□□□□ -0.05
VcpQ01853 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.72□□□□□ -0.05
VcpQ01853 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
VcpQ01853 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
VcpQ01853 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.72□□□□□ -0.05
VcpQ01853 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VcpQ01853 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VcpQ01853 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
VcpQ01853 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Gm21854-201ENSMUST00000179901 471 ntBASIC14.71□□□□□ -0.05
VcpQ01853 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.71□□□□□ -0.05
VcpQ01853 Gm18827-201ENSMUST00000188341 790 ntBASIC14.71□□□□□ -0.05
VcpQ01853 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
VcpQ01853 Mir125a-201ENSMUST00000083545 68 ntBASIC14.71□□□□□ -0.05
VcpQ01853 Olfr582-201ENSMUST00000098212 960 ntBASIC14.71□□□□□ -0.05
VcpQ01853 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VcpQ01853 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VcpQ01853 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VcpQ01853 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
VcpQ01853 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VcpQ01853 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms