Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Xrn1P97789 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Xrn1P97789 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.19■□□□□ 0.66
Xrn1P97789 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Gm44775-201ENSMUST00000207266 1456 ntBASIC19.19■□□□□ 0.66
Xrn1P97789 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.19■□□□□ 0.66
Xrn1P97789 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Xrn1P97789 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Xrn1P97789 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Xrn1P97789 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC19.19■□□□□ 0.66
Xrn1P97789 Gm15276-201ENSMUST00000145953 498 ntBASIC19.19■□□□□ 0.66
Xrn1P97789 Gm5597-201ENSMUST00000182353 1193 ntBASIC19.19■□□□□ 0.66
Xrn1P97789 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC19.19■□□□□ 0.66
Xrn1P97789 CT025533.2-201ENSMUST00000228715 1248 ntBASIC19.19■□□□□ 0.66
Xrn1P97789 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.19■□□□□ 0.66
Xrn1P97789 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Xrn1P97789 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Xrn1P97789 Gm12620-201ENSMUST00000119791 1986 ntBASIC19.18■□□□□ 0.66
Xrn1P97789 Gm12612-201ENSMUST00000140182 1986 ntBASIC19.18■□□□□ 0.66
Xrn1P97789 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrn1P97789 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Xrn1P97789 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrn1P97789 Mir5120-201ENSMUST00000175020 78 ntBASIC19.18■□□□□ 0.66
Xrn1P97789 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC19.18■□□□□ 0.66
Xrn1P97789 Ighv5-7-201ENSMUST00000192302 244 ntBASIC19.18■□□□□ 0.66
Xrn1P97789 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC19.18■□□□□ 0.66
Xrn1P97789 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Xrn1P97789 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Xrn1P97789 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC19.18■□□□□ 0.66
Xrn1P97789 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrn1P97789 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Xrn1P97789 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrn1P97789 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrn1P97789 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Xrn1P97789 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Xrn1P97789 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.18■□□□□ 0.66
Xrn1P97789 Gm3287-205ENSMUST00000228893 1332 ntBASIC19.18■□□□□ 0.66
Xrn1P97789 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC19.17■□□□□ 0.66
Xrn1P97789 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Xrn1P97789 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Xrn1P97789 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Xrn1P97789 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Xrn1P97789 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Xrn1P97789 Gm17208-201ENSMUST00000168388 535 ntBASIC19.17■□□□□ 0.66
Xrn1P97789 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Xrn1P97789 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrn1P97789 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Xrn1P97789 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrn1P97789 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Xrn1P97789 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Xrn1P97789 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Xrn1P97789 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrn1P97789 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrn1P97789 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Xrn1P97789 Gm14109-201ENSMUST00000118814 309 ntBASIC19.16■□□□□ 0.66
Xrn1P97789 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC19.16■□□□□ 0.66
Xrn1P97789 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Xrn1P97789 Gm2546-201ENSMUST00000182630 991 ntBASIC19.16■□□□□ 0.66
Xrn1P97789 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC19.16■□□□□ 0.66
Xrn1P97789 Gm18916-201ENSMUST00000198264 1246 ntBASIC19.16■□□□□ 0.66
Xrn1P97789 Gm29787-201ENSMUST00000222129 849 ntBASIC19.16■□□□□ 0.66
Xrn1P97789 AC154595.3-201ENSMUST00000224579 384 ntBASIC19.16■□□□□ 0.66
Xrn1P97789 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrn1P97789 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Xrn1P97789 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC19.16■□□□□ 0.66
Xrn1P97789 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Xrn1P97789 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrn1P97789 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC19.15■□□□□ 0.66
Xrn1P97789 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrn1P97789 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Xrn1P97789 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC19.15■□□□□ 0.66
Xrn1P97789 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Xrn1P97789 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrn1P97789 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC19.15■□□□□ 0.66
Xrn1P97789 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC19.15■□□□□ 0.66
Xrn1P97789 AC166095.1-201ENSMUST00000223731 1241 ntBASIC19.15■□□□□ 0.66
Xrn1P97789 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrn1P97789 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Xrn1P97789 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms