Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.19■□□□□ 0.34
Smarcc1P97496 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcc1P97496 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.18■□□□□ 0.34
Smarcc1P97496 Gm15770-201ENSMUST00000117498 584 ntBASIC17.18■□□□□ 0.34
Smarcc1P97496 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.18■□□□□ 0.34
Smarcc1P97496 Gm25927-201ENSMUST00000175058 117 ntBASIC17.18■□□□□ 0.34
Smarcc1P97496 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Smarcc1P97496 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.18■□□□□ 0.34
Smarcc1P97496 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.18■□□□□ 0.34
Smarcc1P97496 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.18■□□□□ 0.34
Smarcc1P97496 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smarcc1P97496 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smarcc1P97496 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.18■□□□□ 0.34
Smarcc1P97496 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcc1P97496 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.17■□□□□ 0.34
Smarcc1P97496 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Smarcc1P97496 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Mir877-201ENSMUST00000104738 85 ntBASIC17.17■□□□□ 0.34
Smarcc1P97496 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Smarcc1P97496 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.17■□□□□ 0.34
Smarcc1P97496 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.17■□□□□ 0.34
Smarcc1P97496 Gm26461-201ENSMUST00000175064 290 ntBASIC17.17■□□□□ 0.34
Smarcc1P97496 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Gm38144-201ENSMUST00000192790 465 ntBASIC17.17■□□□□ 0.34
Smarcc1P97496 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.17■□□□□ 0.34
Smarcc1P97496 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.17■□□□□ 0.34
Smarcc1P97496 Gm45865-201ENSMUST00000211815 945 ntBASIC17.17■□□□□ 0.34
Smarcc1P97496 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.17■□□□□ 0.34
Smarcc1P97496 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.17■□□□□ 0.34
Smarcc1P97496 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.17■□□□□ 0.34
Smarcc1P97496 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Smarcc1P97496 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Smarcc1P97496 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.17■□□□□ 0.34
Smarcc1P97496 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.17■□□□□ 0.34
Smarcc1P97496 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Smarcc1P97496 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Smarcc1P97496 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcc1P97496 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.16■□□□□ 0.34
Smarcc1P97496 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Smarcc1P97496 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.16■□□□□ 0.34
Smarcc1P97496 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Gm12241-201ENSMUST00000118330 726 ntBASIC17.16■□□□□ 0.34
Smarcc1P97496 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.16■□□□□ 0.34
Smarcc1P97496 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Smarcc1P97496 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.16■□□□□ 0.34
Smarcc1P97496 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.16■□□□□ 0.34
Smarcc1P97496 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Smarcc1P97496 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcc1P97496 Gm29396-201ENSMUST00000185659 716 ntBASIC17.16■□□□□ 0.34
Smarcc1P97496 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms