Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.73□□□□□ -0.37
Cacna1aP97445 Gm12203-201ENSMUST00000118235 598 ntBASIC12.73□□□□□ -0.37
Cacna1aP97445 Gm12209-201ENSMUST00000120089 596 ntBASIC12.73□□□□□ -0.37
Cacna1aP97445 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.73□□□□□ -0.37
Cacna1aP97445 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cacna1aP97445 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Cacna1aP97445 Cts7-204ENSMUST00000225321 1257 ntBASIC12.73□□□□□ -0.37
Cacna1aP97445 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1aP97445 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1aP97445 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1aP97445 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1aP97445 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1aP97445 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Cacna1aP97445 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cacna1aP97445 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cacna1aP97445 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.72□□□□□ -0.37
Cacna1aP97445 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1aP97445 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.72□□□□□ -0.37
Cacna1aP97445 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.72□□□□□ -0.37
Cacna1aP97445 Gm2383-201ENSMUST00000181461 807 ntBASIC12.72□□□□□ -0.37
Cacna1aP97445 Gm8927-201ENSMUST00000181978 981 ntBASIC12.72□□□□□ -0.37
Cacna1aP97445 Gm38671-201ENSMUST00000200573 130 ntBASIC12.72□□□□□ -0.37
Cacna1aP97445 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Cacna1aP97445 Gm3222-201ENSMUST00000071282 990 ntBASIC12.72□□□□□ -0.37
Cacna1aP97445 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cacna1aP97445 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.72□□□□□ -0.37
Cacna1aP97445 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.72□□□□□ -0.37
Cacna1aP97445 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Cacna1aP97445 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.72□□□□□ -0.37
Cacna1aP97445 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.72□□□□□ -0.37
Cacna1aP97445 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cacna1aP97445 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.71□□□□□ -0.37
Cacna1aP97445 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Gm26927-201ENSMUST00000182385 965 ntBASIC12.71□□□□□ -0.37
Cacna1aP97445 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.71□□□□□ -0.37
Cacna1aP97445 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.71□□□□□ -0.37
Cacna1aP97445 Mir497b-201ENSMUST00000093601 125 ntBASIC12.71□□□□□ -0.37
Cacna1aP97445 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cacna1aP97445 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cacna1aP97445 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cacna1aP97445 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cacna1aP97445 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.71□□□□□ -0.38
Cacna1aP97445 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cacna1aP97445 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1aP97445 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1aP97445 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.71□□□□□ -0.38
Cacna1aP97445 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.71□□□□□ -0.38
Cacna1aP97445 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.71□□□□□ -0.38
Cacna1aP97445 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
Cacna1aP97445 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.71□□□□□ -0.38
Cacna1aP97445 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.71□□□□□ -0.38
Cacna1aP97445 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.71□□□□□ -0.38
Cacna1aP97445 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.71□□□□□ -0.38
Cacna1aP97445 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.71□□□□□ -0.38
Cacna1aP97445 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.71□□□□□ -0.38
Cacna1aP97445 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1aP97445 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1aP97445 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1aP97445 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.71□□□□□ -0.38
Cacna1aP97445 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1aP97445 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cacna1aP97445 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1aP97445 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1aP97445 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1aP97445 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cacna1aP97445 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cacna1aP97445 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1aP97445 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1aP97445 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cacna1aP97445 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Cacna1aP97445 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms