Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim43cP86449 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.99□□□□□ -0.01
Trim43cP86449 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Trim43cP86449 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.99□□□□□ -0.01
Trim43cP86449 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim43cP86449 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.99□□□□□ -0.01
Trim43cP86449 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.99□□□□□ -0.01
Trim43cP86449 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.99□□□□□ -0.01
Trim43cP86449 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.99□□□□□ -0.01
Trim43cP86449 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim43cP86449 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim43cP86449 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim43cP86449 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim43cP86449 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trim43cP86449 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim43cP86449 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Trim43cP86449 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trim43cP86449 Gm18905-201ENSMUST00000205454 928 ntBASIC14.98□□□□□ -0.01
Trim43cP86449 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim43cP86449 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim43cP86449 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.98□□□□□ -0.01
Trim43cP86449 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim43cP86449 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.98□□□□□ -0.01
Trim43cP86449 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim43cP86449 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim43cP86449 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43cP86449 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim43cP86449 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim43cP86449 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim43cP86449 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.97□□□□□ -0.01
Trim43cP86449 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim43cP86449 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim43cP86449 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.97□□□□□ -0.01
Trim43cP86449 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.97□□□□□ -0.01
Trim43cP86449 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Gm20445-201ENSMUST00000061905 565 ntBASIC14.97□□□□□ -0.01
Trim43cP86449 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim43cP86449 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim43cP86449 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim43cP86449 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43cP86449 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms