Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.29□□□□□ -0.44
H3f3aP84244 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H3f3aP84244 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.29□□□□□ -0.44
H3f3aP84244 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.29□□□□□ -0.44
H3f3aP84244 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Gm25925-201ENSMUST00000158314 306 ntBASIC12.29□□□□□ -0.44
H3f3aP84244 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.29□□□□□ -0.44
H3f3aP84244 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.29□□□□□ -0.44
H3f3aP84244 Gm44719-201ENSMUST00000206404 149 ntBASIC12.29□□□□□ -0.44
H3f3aP84244 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.29□□□□□ -0.44
H3f3aP84244 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.29□□□□□ -0.44
H3f3aP84244 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
H3f3aP84244 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.29□□□□□ -0.44
H3f3aP84244 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
H3f3aP84244 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
H3f3aP84244 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H3f3aP84244 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H3f3aP84244 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.28□□□□□ -0.44
H3f3aP84244 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H3f3aP84244 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.28□□□□□ -0.44
H3f3aP84244 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H3f3aP84244 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
H3f3aP84244 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.28□□□□□ -0.44
H3f3aP84244 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
H3f3aP84244 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
H3f3aP84244 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.28□□□□□ -0.44
H3f3aP84244 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.28□□□□□ -0.44
H3f3aP84244 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.28□□□□□ -0.44
H3f3aP84244 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.28□□□□□ -0.44
H3f3aP84244 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
H3f3aP84244 Gm18905-201ENSMUST00000205454 928 ntBASIC12.28□□□□□ -0.44
H3f3aP84244 Gm7730-201ENSMUST00000212486 454 ntBASIC12.28□□□□□ -0.44
H3f3aP84244 Gm9797-201ENSMUST00000052902 613 ntBASIC12.28□□□□□ -0.44
H3f3aP84244 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.28□□□□□ -0.44
H3f3aP84244 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.28□□□□□ -0.44
H3f3aP84244 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
H3f3aP84244 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
H3f3aP84244 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H3f3aP84244 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H3f3aP84244 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H3f3aP84244 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
H3f3aP84244 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
H3f3aP84244 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H3f3aP84244 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H3f3aP84244 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H3f3aP84244 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H3f3aP84244 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
H3f3aP84244 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
H3f3aP84244 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H3f3aP84244 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H3f3aP84244 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
H3f3aP84244 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H3f3aP84244 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.27□□□□□ -0.45
H3f3aP84244 Gm16215-201ENSMUST00000161990 637 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms